Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 MMP23A-201ENST00000234610 1017 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 AC097488.1-201ENST00000507834 756 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 FITM1-202ENST00000559294 800 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 AP000525.1-201ENST00000608286 694 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 AL121761.2-201ENST00000598007 1648 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 CICP6-201ENST00000457191 2729 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 UBALD1-205ENST00000590891 2641 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.31■□□□□ 0.36
AP4B1Q9Y6B7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 LINC00602-201ENST00000629776 2065 ntBASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 AC008040.2-201ENST00000461049 708 ntBASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 AP005242.2-201ENST00000580065 1175 ntBASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4B1Q9Y6B7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4B1Q9Y6B7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms