Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.78■□□□□ 0.92
CTDP1Q9Y5B0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 AP001005.1-201ENST00000571755 1248 ntBASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 AL773604.1-201ENST00000617417 272 ntBASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTDP1Q9Y5B0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTDP1Q9Y5B0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTDP1Q9Y5B0 AC126763.1-201ENST00000552015 2118 ntBASIC20.77■□□□□ 0.91
CTDP1Q9Y5B0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CTDP1Q9Y5B0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTDP1Q9Y5B0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.77■□□□□ 0.91
CTDP1Q9Y5B0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 AC093909.1-201ENST00000504731 1122 ntBASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 MTDHP3-201ENST00000594186 672 ntBASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 AL138831.2-201ENST00000606564 490 ntBASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 TP73-AS1-207ENST00000624167 988 ntBASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 AC125634.1-201ENST00000438758 1403 ntBASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTDP1Q9Y5B0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 AP000347.1-202ENST00000435868 847 ntBASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 AC073648.2-201ENST00000510116 352 ntBASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 AC120114.3-201ENST00000611923 658 ntBASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 HLA-A-201ENST00000376802 1334 ntBASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 ESPNP-201ENST00000270691 2015 ntBASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CTDP1Q9Y5B0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms