Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 KRT18P23-201ENST00000435622 1283 ntBASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 NKILA-202ENST00000614771 2598 ntBASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2D4Q9Y2X8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 DUTP2-201ENST00000519164 463 ntBASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 C1QBPP2-201ENST00000528754 825 ntBASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 SLC25A1P4-201ENST00000567977 778 ntBASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 MIR4674-201ENST00000582457 87 ntBASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 AL024508.2-201ENST00000607749 1894 ntBASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2D4Q9Y2X8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CROCCP1-201ENST00000426910 5675 ntBASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CROCCP2-202ENST00000412962 2773 ntBASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms