Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF2IRD1Q9UHL9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 AC093010.1-201ENST00000473625 1624 ntBASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2IRD1Q9UHL9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 KRT8P47-201ENST00000604727 1398 ntBASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 AC093503.3-201ENST00000624917 2352 ntBASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GTF2IRD1Q9UHL9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 KRT18P27-201ENST00000427733 1299 ntBASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2IRD1Q9UHL9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 SIGLEC16-201ENST00000599858 1437 ntBASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 PHGDH-209ENST00000641074 1780 ntBASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 UPF3AP3-201ENST00000420996 769 ntBASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 AC009947.1-201ENST00000444350 727 ntBASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 PRYP5-201ENST00000451909 266 ntBASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.68■□□□□ 0.74
GTF2IRD1Q9UHL9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms