Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00474Q9P2X8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LINC00474Q9P2X8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 STARP1-201ENST00000397973 869 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 AK4P3-201ENST00000418260 669 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 TSPY5P-201ENST00000426936 936 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 SEC1P-202ENST00000473944 940 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 YBX1P2-201ENST00000489612 999 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 AC073508.3-201ENST00000619697 1419 ntBASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00474Q9P2X8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 GMCL1P1-201ENST00000463439 1581 ntBASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 AL162741.1-201ENST00000565563 1558 ntBASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 TMPOP1-202ENST00000424642 1267 ntBASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms