Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCKIPSDQ9NZQ3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCKIPSDQ9NZQ3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NCKIPSDQ9NZQ3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCKIPSDQ9NZQ3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AC008556.1-201ENST00000610908 2040 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 SEC1P-202ENST00000473944 940 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 PRELID1P1-202ENST00000567272 903 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 MIR3917-201ENST00000580971 93 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AL121894.2-201ENST00000602977 491 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 OR6D1P-202ENST00000641007 5290 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 AL109659.2-201ENST00000606809 1674 ntBASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.22■□□□□ 0.51
NCKIPSDQ9NZQ3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 MYLKP1-201ENST00000509077 1580 ntBASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 AP000997.3-201ENST00000623333 2250 ntBASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 KRT8P26-201ENST00000534154 1276 ntBASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 AC092119.3-201ENST00000612618 583 ntBASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCKIPSDQ9NZQ3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
NCKIPSDQ9NZQ3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
NCKIPSDQ9NZQ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 HLA-F-220ENST00000434407 884 ntBASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.2■□□□□ 0.5
NCKIPSDQ9NZQ3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms