Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 MIR564-202ENST00000385049 94 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 SLC29A4P1-201ENST00000398760 971 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 POM121L13P-201ENST00000422362 380 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 AL445675.2-201ENST00000620291 557 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 AC034236.2-201ENST00000606662 1610 ntBASIC17.45■□□□□ 0.38
NDE1Q9NXR1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 AC026185.1-201ENST00000445748 174 ntBASIC17.44■□□□□ 0.38
NDE1Q9NXR1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 UNC93B4-201ENST00000505679 747 ntBASIC17.44■□□□□ 0.38
NDE1Q9NXR1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDE1Q9NXR1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 AC133963.1-201ENST00000504166 1679 ntBASIC17.43■□□□□ 0.38
NDE1Q9NXR1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NDE1Q9NXR1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms