Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMBRD1Q9NUN5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LMBRD1Q9NUN5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LMBRD1Q9NUN5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.64■□□□□ 0.9
LMBRD1Q9NUN5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 CA15P1-201ENST00000481698 905 ntBASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 AC060834.1-201ENST00000443027 2032 ntBASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 FLJ38576-201ENST00000623820 2459 ntBASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMBRD1Q9NUN5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 AC090340.1-201ENST00000620778 4980 ntBASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 RARRES2P10-201ENST00000564312 460 ntBASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMBRD1Q9NUN5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMBRD1Q9NUN5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms