Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.15■□□□□ 0.34
CCM2LQ9NUG4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCM2LQ9NUG4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.14■□□□□ 0.34
CCM2LQ9NUG4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCM2LQ9NUG4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 AL390955.1-201ENST00000428694 934 ntBASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 OR6D1P-202ENST00000641007 5290 ntBASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2LQ9NUG4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 AP002982.1-201ENST00000492365 877 ntBASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2LQ9NUG4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AL138688.1-201ENST00000624851 1594 ntBASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms