Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ECHDC1Q9NTX5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 AC069148.1-201ENST00000608741 768 ntBASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 AL133373.2-201ENST00000623187 2828 ntBASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ECHDC1Q9NTX5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ECHDC1Q9NTX5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 NPAP1P7-201ENST00000613027 823 ntBASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 AC068880.1-201ENST00000507289 2297 ntBASIC21.89■■□□□ 1.09
ECHDC1Q9NTX5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ECHDC1Q9NTX5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 KRT18P1-202ENST00000452408 1331 ntBASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.87■■□□□ 1.09
ECHDC1Q9NTX5 DRAXINP1-201ENST00000437611 948 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms