Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 AC211429.1-201ENST00000415277 523 ntBASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 AC112497.1-201ENST00000624824 639 ntBASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 AC097493.4-201ENST00000641197 219 ntBASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 KRT8P7-201ENST00000533003 1432 ntBASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 LINC01126-201ENST00000623515 1646 ntBASIC16.78■□□□□ 0.28
CTPS2Q9NRF8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS2Q9NRF8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 AC020916.1-201ENST00000587762 1774 ntBASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.77■□□□□ 0.27
CTPS2Q9NRF8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 ECEL1P3-201ENST00000427961 737 ntBASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 AC010203.1-204ENST00000548782 407 ntBASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTPS2Q9NRF8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms