Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 AL162741.1-201ENST00000565563 1558 ntBASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NECTIN3Q9NQS3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 SPDYE13P-201ENST00000445314 798 ntBASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 AL136038.4-201ENST00000603606 1261 ntBASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.27■□□□□ 0.36
NECTIN3Q9NQS3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NECTIN3Q9NQS3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 LINC00896-202ENST00000609602 2128 ntBASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 PKD1P1-201ENST00000458669 6805 ntBASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 MIR149-201ENST00000384879 89 ntBASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 PVRIG2P-201ENST00000435460 978 ntBASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 VENTXP5-201ENST00000523979 775 ntBASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ZNF444P1-201ENST00000559497 298 ntBASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NECTIN3Q9NQS3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 HLA-F-220ENST00000434407 884 ntBASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 FAM86EP-206ENST00000510506 987 ntBASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NECTIN3Q9NQS3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms