Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 YBX1P10-201ENST00000444752 975 ntBASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AC007322.4-201ENST00000509611 723 ntBASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AF213884.3-201ENST00000563833 479 ntBASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 MTMR9LP-203ENST00000426597 1545 ntBASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AC099063.4-201ENST00000641099 1602 ntBASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.83■□□□□ 0.29
VCX3AQ9NNX9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3AQ9NNX9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.29
VCX3AQ9NNX9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3AQ9NNX9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3AQ9NNX9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3AQ9NNX9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 AL603756.1-201ENST00000606511 2163 ntBASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 AL589743.5-201ENST00000616611 1050 ntBASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3AQ9NNX9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 AC008556.1-201ENST00000610908 2040 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 KRT8P45-201ENST00000414328 1447 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 PBX2P1-201ENST00000493219 1291 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 CYP2T3P-201ENST00000601990 817 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 AC010536.3-201ENST00000620306 533 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 AC013268.1-206ENST00000638368 961 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 AC112229.1-201ENST00000639295 961 ntBASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3AQ9NNX9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms