Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.32■■□□□ 1
NEK1Q96PY6 AL671277.2-201ENST00000458060 996 ntBASIC21.32■■□□□ 1
NEK1Q96PY6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.32■■□□□ 1
NEK1Q96PY6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.32■■□□□ 1
NEK1Q96PY6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.32■■□□□ 1
NEK1Q96PY6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NEK1Q96PY6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.32■■□□□ 1
NEK1Q96PY6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEK1Q96PY6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NEK1Q96PY6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.31■■□□□ 1
NEK1Q96PY6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.31■■□□□ 1
NEK1Q96PY6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.31■■□□□ 1
NEK1Q96PY6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NEK1Q96PY6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NEK1Q96PY6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.31■■□□□ 1
NEK1Q96PY6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEK1Q96PY6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEK1Q96PY6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEK1Q96PY6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.31■■□□□ 1
NEK1Q96PY6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.31■■□□□ 1
NEK1Q96PY6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NEK1Q96PY6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.31■■□□□ 1
NEK1Q96PY6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.31■■□□□ 1
NEK1Q96PY6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.31■■□□□ 1
NEK1Q96PY6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.31■■□□□ 1
NEK1Q96PY6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NEK1Q96PY6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NEK1Q96PY6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.31■■□□□ 1
NEK1Q96PY6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NEK1Q96PY6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
NEK1Q96PY6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NEK1Q96PY6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 AC026471.1-201ENST00000564629 3026 ntBASIC21.3■■□□□ 1
NEK1Q96PY6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.3■■□□□ 1
NEK1Q96PY6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 AC005332.3-201ENST00000589904 676 ntBASIC21.3■■□□□ 1
NEK1Q96PY6 GPR32P1-201ENST00000601788 811 ntBASIC21.3■■□□□ 1
NEK1Q96PY6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 AL353692.3-201ENST00000407031 1396 ntBASIC21.3■■□□□ 1
NEK1Q96PY6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.3■■□□□ 1
NEK1Q96PY6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.3■■□□□ 1
NEK1Q96PY6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEK1Q96PY6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NEK1Q96PY6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.29■■□□□ 1
NEK1Q96PY6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NEK1Q96PY6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 RNF126P1-202ENST00000569893 925 ntBASIC21.29■■□□□ 1
NEK1Q96PY6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 AC009154.2-201ENST00000621177 724 ntBASIC21.29■■□□□ 1
NEK1Q96PY6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NEK1Q96PY6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
NEK1Q96PY6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.29■■□□□ 1
NEK1Q96PY6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NEK1Q96PY6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
NEK1Q96PY6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NEK1Q96PY6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms