Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A4EQ96PG1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 KRT18P65-201ENST00000439811 1286 ntBASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 KRT18P38-201ENST00000449496 1282 ntBASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 AC092597.1-201ENST00000487352 616 ntBASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 AC005332.8-201ENST00000622750 2735 ntBASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.81■□□□□ 0.28
MS4A4EQ96PG1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 LTB4R2-202ENST00000528054 3092 ntBASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 AC112907.2-201ENST00000448639 330 ntBASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 OR6D1P-202ENST00000641007 5290 ntBASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A4EQ96PG1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A4EQ96PG1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms