Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 AC246785.2-201ENST00000432512 513 ntBASIC18.53■□□□□ 0.56
RPRD1AQ96P16 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 AC104819.1-201ENST00000504587 486 ntBASIC18.53■□□□□ 0.56
RPRD1AQ96P16 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 AC074051.2-201ENST00000565115 352 ntBASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPRD1AQ96P16 ABALON-201ENST00000629058 1903 ntBASIC18.53■□□□□ 0.56
RPRD1AQ96P16 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 AC091607.1-201ENST00000490318 1060 ntBASIC18.52■□□□□ 0.56
RPRD1AQ96P16 AC112698.1-201ENST00000510299 916 ntBASIC18.52■□□□□ 0.56
RPRD1AQ96P16 DUTP2-201ENST00000519164 463 ntBASIC18.52■□□□□ 0.56
RPRD1AQ96P16 AC012615.1-201ENST00000565797 1299 ntBASIC18.52■□□□□ 0.56
RPRD1AQ96P16 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPRD1AQ96P16 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.52■□□□□ 0.55
RPRD1AQ96P16 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 AC022898.2-201ENST00000616822 1312 ntBASIC18.51■□□□□ 0.55
RPRD1AQ96P16 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 KRT17P6-201ENST00000453795 1220 ntBASIC18.51■□□□□ 0.55
RPRD1AQ96P16 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 AP005901.3-202ENST00000581653 237 ntBASIC18.51■□□□□ 0.55
RPRD1AQ96P16 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 CLEC4GP1-201ENST00000596555 870 ntBASIC18.51■□□□□ 0.55
RPRD1AQ96P16 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 AL353801.3-201ENST00000609898 542 ntBASIC18.51■□□□□ 0.55
RPRD1AQ96P16 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPRD1AQ96P16 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms