Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 AC096633.1-201ENST00000422446 749 ntBASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 MKNK2P1-201ENST00000437526 628 ntBASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 SPDYE21P-201ENST00000413323 827 ntBASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 AL645939.2-201ENST00000427340 991 ntBASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 CNN2P11-201ENST00000429351 262 ntBASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN4Q96NY8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AC103564.2-201ENST00000432853 1299 ntBASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN4Q96NY8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 HTR5BP-201ENST00000430851 1154 ntBASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 ALG1L5P-201ENST00000482043 771 ntBASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 AP002472.1-201ENST00000577490 586 ntBASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.54■□□□□ 0.56
NECTIN4Q96NY8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms