Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 KRT89P-201ENST00000620027 1478 ntBASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 AC020907.5-201ENST00000624372 1936 ntBASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 CRYGEP-201ENST00000412192 528 ntBASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 LINC00628-201ENST00000628516 1289 ntBASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 AL358472.5-202ENST00000641448 1267 ntBASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 LETM1P2-201ENST00000597330 2178 ntBASIC17.15■□□□□ 0.34
CNTNAP3BQ96NU0 HCG11-201ENST00000411553 5696 ntBASIC17.14■□□□□ 0.34
CNTNAP3BQ96NU0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 ARSEP1-201ENST00000420443 635 ntBASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 AIRN-201ENST00000601203 4374 ntBASIC17.14■□□□□ 0.33
CNTNAP3BQ96NU0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 BASP1P1-201ENST00000430708 665 ntBASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3BQ96NU0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms