Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 AP000347.1-202ENST00000435868 847 ntBASIC20.93■□□□□ 0.94
CCDC17Q96LX7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 AC148477.8-201ENST00000624298 468 ntBASIC20.93■□□□□ 0.94
CCDC17Q96LX7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC17Q96LX7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 AL356309.3-201ENST00000624132 1934 ntBASIC20.92■□□□□ 0.94
CCDC17Q96LX7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 AC103564.2-201ENST00000432853 1299 ntBASIC20.92■□□□□ 0.94
CCDC17Q96LX7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 AL139288.1-201ENST00000623748 933 ntBASIC20.92■□□□□ 0.94
CCDC17Q96LX7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC17Q96LX7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 AL022342.1-201ENST00000400363 863 ntBASIC20.91■□□□□ 0.94
CCDC17Q96LX7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 AC093909.1-201ENST00000504731 1122 ntBASIC20.91■□□□□ 0.94
CCDC17Q96LX7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 SART3-203ENST00000546611 1184 ntBASIC20.91■□□□□ 0.94
CCDC17Q96LX7 AC021087.4-201ENST00000563761 564 ntBASIC20.91■□□□□ 0.94
CCDC17Q96LX7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC17Q96LX7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC17Q96LX7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms