Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SNX27Q96L92 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.37■□□□□ 0.69
SNX27Q96L92 AL591684.3-201ENST00000605187 298 ntBASIC19.37■□□□□ 0.69
SNX27Q96L92 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 REXO1L6P-202ENST00000619970 1078 ntBASIC19.37■□□□□ 0.69
SNX27Q96L92 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.37■□□□□ 0.69
SNX27Q96L92 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SNX27Q96L92 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX27Q96L92 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SNX27Q96L92 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX27Q96L92 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX27Q96L92 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.36■□□□□ 0.69
SNX27Q96L92 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX27Q96L92 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
SNX27Q96L92 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SNX27Q96L92 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX27Q96L92 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNX27Q96L92 MIR574-201ENST00000385209 96 ntBASIC19.36■□□□□ 0.69
SNX27Q96L92 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX27Q96L92 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SNX27Q96L92 AC140113.2-201ENST00000604370 208 ntBASIC19.36■□□□□ 0.69
SNX27Q96L92 BX640515.1-201ENST00000617215 977 ntBASIC19.36■□□□□ 0.69
SNX27Q96L92 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SNX27Q96L92 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.36■□□□□ 0.69
SNX27Q96L92 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX27Q96L92 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX27Q96L92 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 INTS4P1-201ENST00000438455 1935 ntBASIC19.35■□□□□ 0.69
SNX27Q96L92 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNX27Q96L92 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.35■□□□□ 0.69
SNX27Q96L92 AC079781.3-201ENST00000449110 356 ntBASIC19.35■□□□□ 0.69
SNX27Q96L92 SAPCD2P3-201ENST00000455031 850 ntBASIC19.35■□□□□ 0.69
SNX27Q96L92 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.35■□□□□ 0.69
SNX27Q96L92 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.35■□□□□ 0.69
SNX27Q96L92 AC106795.1-205ENST00000512851 1056 ntBASIC19.35■□□□□ 0.69
SNX27Q96L92 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.35■□□□□ 0.69
SNX27Q96L92 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SNX27Q96L92 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX27Q96L92 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNX27Q96L92 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SNX27Q96L92 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms