Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PGBD1Q96JS3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PGBD1Q96JS3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PGBD1Q96JS3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PGBD1Q96JS3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PGBD1Q96JS3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD1Q96JS3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 AC006116.8-202ENST00000587620 1550 ntBASIC20.9■□□□□ 0.94
PGBD1Q96JS3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 AC139713.2-201ENST00000641328 2723 ntBASIC20.9■□□□□ 0.94
PGBD1Q96JS3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 UPK3BP1-201ENST00000428678 509 ntBASIC20.9■□□□□ 0.94
PGBD1Q96JS3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 AC009065.1-201ENST00000564055 1225 ntBASIC20.9■□□□□ 0.94
PGBD1Q96JS3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD1Q96JS3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD1Q96JS3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD1Q96JS3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD1Q96JS3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PGBD1Q96JS3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD1Q96JS3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 AC091076.1-201ENST00000610741 619 ntBASIC20.89■□□□□ 0.93
PGBD1Q96JS3 AC093458.2-201ENST00000623150 629 ntBASIC20.89■□□□□ 0.93
PGBD1Q96JS3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD1Q96JS3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 PP12613-201ENST00000424958 2230 ntBASIC20.88■□□□□ 0.93
PGBD1Q96JS3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 AC024563.2-201ENST00000603282 481 ntBASIC20.88■□□□□ 0.93
PGBD1Q96JS3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 AL645608.8-201ENST00000606034 2086 ntBASIC20.88■□□□□ 0.93
PGBD1Q96JS3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD1Q96JS3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms