Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 AC079776.2-201ENST00000641154 1609 ntBASIC15.21■□□□□ 0.03
SPG11Q96JI7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPG11Q96JI7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SPG11Q96JI7 AC006504.4-201ENST00000592118 1568 ntBASIC15.21■□□□□ 0.03
SPG11Q96JI7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPG11Q96JI7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPG11Q96JI7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SPG11Q96JI7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPG11Q96JI7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPG11Q96JI7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPG11Q96JI7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 AC073621.1-201ENST00000392730 636 ntBASIC15.21■□□□□ 0.02
SPG11Q96JI7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 AC007274.1-201ENST00000439805 662 ntBASIC15.21■□□□□ 0.02
SPG11Q96JI7 BCRP1-201ENST00000444246 691 ntBASIC15.21■□□□□ 0.02
SPG11Q96JI7 AC190387.1-201ENST00000551683 408 ntBASIC15.21■□□□□ 0.02
SPG11Q96JI7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.21■□□□□ 0.02
SPG11Q96JI7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPG11Q96JI7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPG11Q96JI7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPG11Q96JI7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPG11Q96JI7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.2■□□□□ 0.02
SPG11Q96JI7 ELL2P1-201ENST00000413990 1906 ntBASIC15.2■□□□□ 0.02
SPG11Q96JI7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 TSEN15P1-201ENST00000423257 515 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 KRT18P65-201ENST00000439811 1286 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC108073.2-201ENST00000464002 357 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC008687.5-201ENST00000593746 558 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 AL022326.1-202ENST00000641533 845 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 HLA-V-201ENST00000429037 534 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 AL513190.1-201ENST00000621254 727 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 AC068587.9-201ENST00000641814 219 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SPG11Q96JI7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPG11Q96JI7 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.19■□□□□ 0.02
SPG11Q96JI7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms