Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.55■□□□□ 0.56
HDAC11Q96DB2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 AC018470.1-201ENST00000624790 3129 ntBASIC18.55■□□□□ 0.56
HDAC11Q96DB2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HDAC11Q96DB2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 HBZP1-201ENST00000354915 429 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 TMPOP1-202ENST00000424642 1267 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 AC112907.2-201ENST00000448639 330 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 AC092647.4-201ENST00000457211 535 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 DUX4L26-201ENST00000489078 1255 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 AC022616.7-201ENST00000525383 220 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 HYMAI.1-201ENST00000620949 238 ntBASIC18.54■□□□□ 0.56
HDAC11Q96DB2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC11Q96DB2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 AC068880.1-201ENST00000507289 2297 ntBASIC18.53■□□□□ 0.56
HDAC11Q96DB2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC11Q96DB2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC11Q96DB2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC11Q96DB2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC11Q96DB2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC11Q96DB2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.52■□□□□ 0.56
HDAC11Q96DB2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms