Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC116407.2-201ENST00000613639 860 ntBASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 AC124864.1-201ENST00000623408 392 ntBASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTHRC1Q96CG8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AC012317.2-201ENST00000623305 2251 ntBASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 GNAS-203ENST00000306120 1878 ntBASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 DDX43P3-201ENST00000441064 443 ntBASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 TSSC2-201ENST00000450217 709 ntBASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AC097374.2-201ENST00000618617 1306 ntBASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 AC009949.1-201ENST00000623048 1830 ntBASIC16.66■□□□□ 0.26
CTHRC1Q96CG8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 AC096633.1-201ENST00000422446 749 ntBASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 AC246785.2-201ENST00000432512 513 ntBASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 AP002383.4-201ENST00000442518 975 ntBASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTHRC1Q96CG8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CTHRC1Q96CG8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 DRAXINP1-201ENST00000437611 948 ntBASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms