Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC090616.6-201ENST00000582640 721 ntBASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC099336.1-202ENST00000602961 463 ntBASIC23.11■■□□□ 1.29
ZNF428Q96B54 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC233702.3-201ENST00000578656 1387 ntBASIC23.11■■□□□ 1.29
ZNF428Q96B54 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF428Q96B54 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF428Q96B54 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.1■■□□□ 1.29
ZNF428Q96B54 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF428Q96B54 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
ZNF428Q96B54 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 AC112698.1-201ENST00000510299 916 ntBASIC23.09■■□□□ 1.29
ZNF428Q96B54 GUSBP12-201ENST00000513727 720 ntBASIC23.09■■□□□ 1.29
ZNF428Q96B54 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF428Q96B54 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.09■■□□□ 1.29
ZNF428Q96B54 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZNF428Q96B54 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZNF428Q96B54 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZNF428Q96B54 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
ZNF428Q96B54 AP000347.1-202ENST00000435868 847 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms