Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 AC100803.2-201ENST00000562459 1963 ntBASIC16.18■□□□□ 0.18
PTP4A1Q93096 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 HTR7P1-202ENST00000624664 4411 ntBASIC16.18■□□□□ 0.18
PTP4A1Q93096 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 AC007663.1-201ENST00000438948 1240 ntBASIC16.18■□□□□ 0.18
PTP4A1Q93096 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 AC046158.3-201ENST00000624947 2558 ntBASIC16.18■□□□□ 0.18
PTP4A1Q93096 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.18■□□□□ 0.18
PTP4A1Q93096 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTP4A1Q93096 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTP4A1Q93096 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTP4A1Q93096 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 AC010240.3-201ENST00000607688 395 ntBASIC16.16■□□□□ 0.18
PTP4A1Q93096 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 AC010947.1-201ENST00000623454 693 ntBASIC16.16■□□□□ 0.18
PTP4A1Q93096 AC010653.2-201ENST00000623505 997 ntBASIC16.16■□□□□ 0.18
PTP4A1Q93096 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.16■□□□□ 0.18
PTP4A1Q93096 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 CYP2D8P-201ENST00000433633 1490 ntBASIC16.16■□□□□ 0.18
PTP4A1Q93096 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTP4A1Q93096 BCL2-203ENST00000589955 5011 ntBASIC16.16■□□□□ 0.18
PTP4A1Q93096 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.15■□□□□ 0.18
PTP4A1Q93096 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A1Q93096 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A1Q93096 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A1Q93096 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A1Q93096 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms