Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 AC063952.2-201ENST00000498792 1227 ntBASIC17.59■□□□□ 0.41
ATL1Q8WXF7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATL1Q8WXF7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATL1Q8WXF7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 RCN1P1-201ENST00000400413 996 ntBASIC17.58■□□□□ 0.4
ATL1Q8WXF7 TMPOP1-202ENST00000424642 1267 ntBASIC17.58■□□□□ 0.4
ATL1Q8WXF7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 AC104076.2-201ENST00000448912 469 ntBASIC17.58■□□□□ 0.4
ATL1Q8WXF7 AL359075.1-203ENST00000462729 1002 ntBASIC17.58■□□□□ 0.4
ATL1Q8WXF7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 AC008764.6-201ENST00000595909 2069 ntBASIC17.58■□□□□ 0.4
ATL1Q8WXF7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.58■□□□□ 0.4
ATL1Q8WXF7 KRT18P55-202ENST00000578578 1546 ntBASIC17.57■□□□□ 0.4
ATL1Q8WXF7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 LINC00167-201ENST00000530583 1419 ntBASIC17.57■□□□□ 0.4
ATL1Q8WXF7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 AC112907.2-201ENST00000448639 330 ntBASIC17.57■□□□□ 0.4
ATL1Q8WXF7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 ZNF444P1-201ENST00000559497 298 ntBASIC17.57■□□□□ 0.4
ATL1Q8WXF7 RN7SL850P-201ENST00000579959 291 ntBASIC17.57■□□□□ 0.4
ATL1Q8WXF7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms