Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.85■□□□□ 0.77
ATRIPQ8WXE1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATRIPQ8WXE1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATRIPQ8WXE1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
ATRIPQ8WXE1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATRIPQ8WXE1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 YBX1P2-201ENST00000489612 999 ntBASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 AC116562.4-202ENST00000641738 218 ntBASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 AL096828.2-201ENST00000567259 1965 ntBASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.84■□□□□ 0.77
ATRIPQ8WXE1 IER3-202ENST00000376377 1350 ntBASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AC004980.1-204ENST00000429707 299 ntBASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AC011506.1-201ENST00000474329 610 ntBASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AC131212.4-201ENST00000623606 975 ntBASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AL121956.5-201ENST00000625261 221 ntBASIC19.83■□□□□ 0.77
ATRIPQ8WXE1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATRIPQ8WXE1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 AC008040.2-201ENST00000461049 708 ntBASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 AL691432.3-201ENST00000621860 400 ntBASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 AL138966.2-201ENST00000621997 464 ntBASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms