Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 TSPY17P-201ENST00000450329 467 ntBASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 TSPY15P-201ENST00000457163 923 ntBASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 GPAT2P1-201ENST00000444924 1672 ntBASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 AL023284.2-201ENST00000405850 579 ntBASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 MCCD1P1-208ENST00000445732 328 ntBASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 AL023803.3-201ENST00000615559 522 ntBASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 PP12613-201ENST00000424958 2230 ntBASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTN4IP1Q8WWV3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AC141586.5-201ENST00000624546 2050 ntBASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AC006116.8-202ENST00000587620 1550 ntBASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 MMP23A-201ENST00000234610 1017 ntBASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AL353719.1-201ENST00000566847 864 ntBASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 AC116562.4-202ENST00000641738 218 ntBASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.16■□□□□ 0.02
RTN4IP1Q8WWV3 CROCCP1-201ENST00000426910 5675 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms