Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 CRYGFP-201ENST00000418459 633 ntBASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SLC25A1P2-201ENST00000430693 912 ntBASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC022898.2-201ENST00000616822 1312 ntBASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SNORA78-201ENST00000459373 127 ntBASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 MIR4497-201ENST00000583208 89 ntBASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 AC010240.3-201ENST00000607688 395 ntBASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.75■□□□□ 0.11
RPS4Y2Q8TD47 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 KRT17P2-201ENST00000300992 1314 ntBASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 HTR7P1-202ENST00000624664 4411 ntBASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms