Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 KRT18P67-201ENST00000432816 1264 ntBASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 AP001005.1-201ENST00000571755 1248 ntBASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 AL390961.4-201ENST00000623958 2535 ntBASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SHKBP1Q8TBC3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 AL138831.2-201ENST00000606564 490 ntBASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHKBP1Q8TBC3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 AL671883.3-201ENST00000603274 991 ntBASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHKBP1Q8TBC3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms