Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC090616.6-201ENST00000582640 721 ntBASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 IGHV3-41-201ENST00000613121 348 ntBASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 IGHGP-201ENST00000390555 1178 ntBASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 AP000593.1-201ENST00000393668 712 ntBASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 NUS1P1-201ENST00000446295 882 ntBASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 AC111152.3-201ENST00000569699 673 ntBASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 AC083906.6-201ENST00000641366 219 ntBASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDND2Q8NHS1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDND2Q8NHS1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms