Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 UGT1A2P-201ENST00000454886 866 ntBASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
COL22A1Q8NFW1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.83■■□□□ 1.4
COL22A1Q8NFW1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL22A1Q8NFW1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL22A1Q8NFW1 AL049757.1-201ENST00000616842 1596 ntBASIC23.83■■□□□ 1.4
COL22A1Q8NFW1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 SIRPAP1-201ENST00000448467 1770 ntBASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 DUX4L17-201ENST00000557360 1267 ntBASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.82■■□□□ 1.4
COL22A1Q8NFW1 GK-202ENST00000378941 458 ntTSL 3 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 TERF1P3-201ENST00000505638 1227 ntBASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 CNN2P2-201ENST00000443536 909 ntBASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 CNN2P3-201ENST00000450201 906 ntBASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 AL136317.3-201ENST00000618497 906 ntBASIC23.81■■□□□ 1.4
COL22A1Q8NFW1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 AL355306.1-201ENST00000415580 579 ntBASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL22A1Q8NFW1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 PTCHD3P3-201ENST00000403073 906 ntBASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 DDX43P3-201ENST00000441064 443 ntBASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL22A1Q8NFW1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 HLA-V-201ENST00000429037 534 ntBASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL22A1Q8NFW1 CXCL1P1-201ENST00000502804 216 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms