Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 AC245052.3-201ENST00000450182 901 ntBASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 AP003680.1-201ENST00000598970 3660 ntBASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 DMBT1P1-203ENST00000636837 4628 ntBASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 AC079781.5-202ENST00000641784 3743 ntBASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 AP001271.2-201ENST00000624018 1556 ntBASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.88□□□□□ -0.83
SPTSSBQ8NFR3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms