Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 AC112777.1-201ENST00000540175 1423 ntBASIC20.38■□□□□ 0.85
RETREG2Q8NC44 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 MRPL3P1-201ENST00000400109 1033 ntBASIC20.38■□□□□ 0.85
RETREG2Q8NC44 IGHV3-47-201ENST00000425060 335 ntBASIC20.38■□□□□ 0.85
RETREG2Q8NC44 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.38■□□□□ 0.85
RETREG2Q8NC44 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 AC068880.1-201ENST00000507289 2297 ntBASIC20.38■□□□□ 0.85
RETREG2Q8NC44 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETREG2Q8NC44 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 MIR149-201ENST00000384879 89 ntBASIC20.37■□□□□ 0.85
RETREG2Q8NC44 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.37■□□□□ 0.85
RETREG2Q8NC44 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 AC064862.7-201ENST00000604520 867 ntBASIC20.36■□□□□ 0.85
RETREG2Q8NC44 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 AL499627.1-201ENST00000569373 2188 ntBASIC20.36■□□□□ 0.85
RETREG2Q8NC44 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.36■□□□□ 0.85
RETREG2Q8NC44 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 AC120114.3-201ENST00000611923 658 ntBASIC20.35■□□□□ 0.85
RETREG2Q8NC44 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms