Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNEP1R1Q8N9A8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 WIZP1-201ENST00000531444 2299 ntBASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 AL353801.3-201ENST00000609898 542 ntBASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNEP1R1Q8N9A8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 AC073592.3-201ENST00000625118 1834 ntBASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 POM121L3P-201ENST00000419331 1163 ntBASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNEP1R1Q8N9A8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CNEP1R1Q8N9A8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CNEP1R1Q8N9A8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNEP1R1Q8N9A8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CNEP1R1Q8N9A8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNEP1R1Q8N9A8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 BNIP3P18-201ENST00000593976 575 ntBASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 AL591684.3-201ENST00000605187 298 ntBASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNEP1R1Q8N9A8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms