Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 KRT18P67-201ENST00000432816 1264 ntBASIC18.31■□□□□ 0.52
CHPFQ8IZ52 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 BX640515.1-201ENST00000617215 977 ntBASIC18.31■□□□□ 0.52
CHPFQ8IZ52 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHPFQ8IZ52 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHPFQ8IZ52 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 KRT18P65-201ENST00000439811 1286 ntBASIC18.29■□□□□ 0.52
CHPFQ8IZ52 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
CHPFQ8IZ52 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.28■□□□□ 0.52
CHPFQ8IZ52 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 AL031284.1-201ENST00000419297 478 ntBASIC18.28■□□□□ 0.52
CHPFQ8IZ52 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.28■□□□□ 0.52
CHPFQ8IZ52 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms