Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 BANP-227ENST00000626016 2144 ntTSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 KRT18P48-201ENST00000434763 852 ntBASIC22.25■■□□□ 1.15
SMC5Q8IY18 DDX43P3-201ENST00000441064 443 ntBASIC22.25■■□□□ 1.15
SMC5Q8IY18 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SMC5Q8IY18 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMC5Q8IY18 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 HBZP1-201ENST00000354915 429 ntBASIC22.24■■□□□ 1.15
SMC5Q8IY18 IGHGP-201ENST00000390555 1178 ntBASIC22.24■■□□□ 1.15
SMC5Q8IY18 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMC5Q8IY18 HLA-J-201ENST00000462773 1622 ntBASIC22.24■■□□□ 1.15
SMC5Q8IY18 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.24■■□□□ 1.15
SMC5Q8IY18 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 TSPY5P-201ENST00000426936 936 ntBASIC22.23■■□□□ 1.15
SMC5Q8IY18 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.23■■□□□ 1.15
SMC5Q8IY18 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMC5Q8IY18 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms