Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A2Q8IWA5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A2Q8IWA5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC44A2Q8IWA5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 AC138028.4-201ENST00000564984 1845 ntBASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 NEK4P2-201ENST00000580004 1012 ntBASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 AC024243.1-201ENST00000609234 778 ntBASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 AL138966.2-201ENST00000621997 464 ntBASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC44A2Q8IWA5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC44A2Q8IWA5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC44A2Q8IWA5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 TERF1P1-201ENST00000311003 1181 ntBASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AC005521.1-201ENST00000393351 872 ntBASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AL096828.2-201ENST00000567259 1965 ntBASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A2Q8IWA5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms