Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 AC034105.1-201ENST00000563488 319 ntBASIC19.07■□□□□ 0.64
RNF135Q8IUD6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF135Q8IUD6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 AC006333.2-201ENST00000607957 2099 ntBASIC19.06■□□□□ 0.64
RNF135Q8IUD6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 KRT18P3-201ENST00000451602 1288 ntBASIC19.06■□□□□ 0.64
RNF135Q8IUD6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.06■□□□□ 0.64
RNF135Q8IUD6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF135Q8IUD6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 RBM17P3-201ENST00000417687 1192 ntBASIC19.05■□□□□ 0.64
RNF135Q8IUD6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 MIR3180-4-201ENST00000582223 153 ntBASIC19.05■□□□□ 0.64
RNF135Q8IUD6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 HTR7P1-202ENST00000624664 4411 ntBASIC19.05■□□□□ 0.64
RNF135Q8IUD6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF135Q8IUD6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 AC040169.1-201ENST00000565382 521 ntBASIC19.04■□□□□ 0.64
RNF135Q8IUD6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF135Q8IUD6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms