Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LDB1Q86U70 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.98■□□□□ 0.47
LDB1Q86U70 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 HLA-F-220ENST00000434407 884 ntBASIC17.98■□□□□ 0.47
LDB1Q86U70 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.98■□□□□ 0.47
LDB1Q86U70 AC112907.2-201ENST00000448639 330 ntBASIC17.98■□□□□ 0.47
LDB1Q86U70 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB1Q86U70 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB1Q86U70 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.98■□□□□ 0.47
LDB1Q86U70 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LDB1Q86U70 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LDB1Q86U70 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB1Q86U70 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB1Q86U70 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 TMPOP1-202ENST00000424642 1267 ntBASIC17.97■□□□□ 0.47
LDB1Q86U70 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
LDB1Q86U70 VENTXP5-201ENST00000523979 775 ntBASIC17.97■□□□□ 0.47
LDB1Q86U70 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.97■□□□□ 0.47
LDB1Q86U70 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 HYMAI.1-201ENST00000620949 238 ntBASIC17.97■□□□□ 0.47
LDB1Q86U70 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB1Q86U70 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LDB1Q86U70 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.97■□□□□ 0.47
LDB1Q86U70 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB1Q86U70 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 AC092647.4-201ENST00000457211 535 ntBASIC17.96■□□□□ 0.47
LDB1Q86U70 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.96■□□□□ 0.47
LDB1Q86U70 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB1Q86U70 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.96■□□□□ 0.47
LDB1Q86U70 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.96■□□□□ 0.47
LDB1Q86U70 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB1Q86U70 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB1Q86U70 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB1Q86U70 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB1Q86U70 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms