Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF549Q6P9A3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 AC113404.2-201ENST00000507884 177 ntBASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 AC024563.2-201ENST00000603282 481 ntBASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF549Q6P9A3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 AC008687.5-201ENST00000593746 558 ntBASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 LINC01023-201ENST00000606054 436 ntBASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF549Q6P9A3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 TSPY5P-201ENST00000426936 936 ntBASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms