Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 AC010203.1-204ENST00000548782 407 ntBASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.41■□□□□ 0.38
LETMD1Q6P1Q0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 AC141586.5-201ENST00000624546 2050 ntBASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 HTR7P1-202ENST00000624664 4411 ntBASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 AC034232.1-201ENST00000506026 1064 ntBASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 AC079602.3-201ENST00000623931 403 ntBASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LETMD1Q6P1Q0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AC108860.2-201ENST00000562760 2183 ntBASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 RASA4DP-201ENST00000460726 1199 ntBASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AC113404.2-201ENST00000507884 177 ntBASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AC022898.2-201ENST00000616822 1312 ntBASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LETMD1Q6P1Q0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms