Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 REXO1L9P-201ENST00000604264 2108 ntBASIC20■□□□□ 0.79
SWSAP1Q6NVH7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 FDX1P1-201ENST00000449115 551 ntBASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AL160237.2-201ENST00000556165 472 ntBASIC20■□□□□ 0.79
SWSAP1Q6NVH7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AL121912.1-201ENST00000603683 238 ntBASIC20■□□□□ 0.79
SWSAP1Q6NVH7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 TBC1D3P5-201ENST00000579401 1545 ntBASIC20■□□□□ 0.79
SWSAP1Q6NVH7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 AC022898.2-201ENST00000616822 1312 ntBASIC20■□□□□ 0.79
SWSAP1Q6NVH7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 KRT8P47-201ENST00000604727 1398 ntBASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 AC009078.2-202ENST00000463353 338 ntBASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 KRT8P10-201ENST00000450021 1447 ntBASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.99■□□□□ 0.79
SWSAP1Q6NVH7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 AC097374.2-201ENST00000618617 1306 ntBASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SWSAP1Q6NVH7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms