Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SIGLEC16-201ENST00000599858 1437 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 SPDYE21P-201ENST00000413323 827 ntBASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 METTL21AP1-201ENST00000438852 635 ntBASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 SNHG9-202ENST00000564014 471 ntBASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 AC005082.1-201ENST00000413042 2259 ntBASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD4Q5XG99 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AC132938.6-201ENST00000623828 1655 ntBASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AC002310.6-201ENST00000624451 1377 ntBASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 AL589182.2-201ENST00000619332 1049 ntBASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LYSMD4Q5XG99 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 AC010460.3-201ENST00000511359 1579 ntBASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD4Q5XG99 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 AC103564.2-201ENST00000432853 1299 ntBASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 KRT18P2-201ENST00000447938 1258 ntBASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 AC073592.5-201ENST00000624854 528 ntBASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD4Q5XG99 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms