Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 GID4-202ENST00000376345 1391 ntTSL 3 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 POLD4-207ENST00000531239 584 ntTSL 2 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.04■■□□□ 1.92
CDC42BPAQ5VT25 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 RFPL4AP1-201ENST00000530883 850 ntBASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 PUS1-205ENST00000535067 838 ntTSL 3 BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDC42BPAQ5VT25 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 AC100803.2-201ENST00000562459 1963 ntBASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 ADH5P3-201ENST00000433842 1137 ntBASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.02■■□□□ 1.92
CDC42BPAQ5VT25 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 GPR89P-201ENST00000407924 1495 ntBASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 AC003669.1-201ENST00000334569 611 ntBASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 MKNK2P1-201ENST00000437526 628 ntBASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 PDPK2P-202ENST00000562415 1191 ntBASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC27.01■■□□□ 1.91
CDC42BPAQ5VT25 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27■■□□□ 1.91
CDC42BPAQ5VT25 DUTP2-201ENST00000519164 463 ntBASIC27■■□□□ 1.91
CDC42BPAQ5VT25 IGHV3-65-201ENST00000523210 341 ntBASIC27■■□□□ 1.91
CDC42BPAQ5VT25 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC27■■□□□ 1.91
CDC42BPAQ5VT25 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 ATP6V0CP3-201ENST00000417255 467 ntBASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 ELL2P1-201ENST00000413990 1906 ntBASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms