Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13DQ5THJ4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13DQ5THJ4 PHGDH-209ENST00000641074 1780 ntBASIC12.02□□□□□ -0.48
VPS13DQ5THJ4 KRT18P28-201ENST00000453838 1332 ntBASIC12.02□□□□□ -0.48
VPS13DQ5THJ4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 HLA-J-203ENST00000494367 1087 ntBASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 AC126763.1-201ENST00000552015 2118 ntBASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 AL020989.1-201ENST00000422979 469 ntBASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 C20orf181-201ENST00000623918 480 ntBASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 AC092902.6-201ENST00000641783 218 ntBASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 NCF1C-201ENST00000438382 1427 ntBASIC12.02□□□□□ -0.49
VPS13DQ5THJ4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 AC093520.2-201ENST00000561830 333 ntBASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 AC010507.1-201ENST00000633895 436 ntBASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 AC100803.2-201ENST00000562459 1963 ntBASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13DQ5THJ4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 CD82-202ENST00000342935 967 ntTSL 5 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 GPR89P-201ENST00000407924 1495 ntBASIC12□□□□□ -0.49
VPS13DQ5THJ4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 SNHG9-202ENST00000564014 471 ntBASIC12□□□□□ -0.49
VPS13DQ5THJ4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms