Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.01■□□□□ 0.63
VARS2Q5ST30 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VARS2Q5ST30 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19■□□□□ 0.63
VARS2Q5ST30 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19■□□□□ 0.63
VARS2Q5ST30 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19■□□□□ 0.63
VARS2Q5ST30 FAM220CP-201ENST00000395253 831 ntBASIC19■□□□□ 0.63
VARS2Q5ST30 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19■□□□□ 0.63
VARS2Q5ST30 DUTP2-201ENST00000519164 463 ntBASIC19■□□□□ 0.63
VARS2Q5ST30 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19■□□□□ 0.63
VARS2Q5ST30 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19■□□□□ 0.63
VARS2Q5ST30 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19■□□□□ 0.63
VARS2Q5ST30 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19■□□□□ 0.63
VARS2Q5ST30 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 AC093503.3-201ENST00000624917 2352 ntBASIC19■□□□□ 0.63
VARS2Q5ST30 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
VARS2Q5ST30 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
VARS2Q5ST30 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VARS2Q5ST30 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 AC096633.1-201ENST00000422446 749 ntBASIC18.99■□□□□ 0.63
VARS2Q5ST30 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.99■□□□□ 0.63
VARS2Q5ST30 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 AL096828.2-201ENST00000567259 1965 ntBASIC18.99■□□□□ 0.63
VARS2Q5ST30 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VARS2Q5ST30 AC022898.2-201ENST00000616822 1312 ntBASIC18.99■□□□□ 0.63
VARS2Q5ST30 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.99■□□□□ 0.63
VARS2Q5ST30 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 SART3-203ENST00000546611 1184 ntBASIC18.98■□□□□ 0.63
VARS2Q5ST30 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms