Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 AC004790.2-201ENST00000623588 572 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 TCF3P1-201ENST00000423021 1937 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 LINC01126-201ENST00000623515 1646 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 COX5BP8-201ENST00000416911 349 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 HILS1-202ENST00000545329 423 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 MIR6805-201ENST00000615055 62 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 AL390754.1-201ENST00000619088 582 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 CU639417.3-201ENST00000624240 1404 ntBASIC15.5■□□□□ 0.07
LRRK2Q5S007 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRK2Q5S007 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRK2Q5S007 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 MIR1909-201ENST00000411312 80 ntBASIC15.49■□□□□ 0.07
LRRK2Q5S007 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 AC008667.4-201ENST00000607370 168 ntBASIC15.49■□□□□ 0.07
LRRK2Q5S007 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.49■□□□□ 0.07
LRRK2Q5S007 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 FP475955.4-201ENST00000623131 1990 ntBASIC15.49■□□□□ 0.07
LRRK2Q5S007 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRK2Q5S007 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRK2Q5S007 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 KLF2P3-201ENST00000451977 1087 ntBASIC15.48■□□□□ 0.07
LRRK2Q5S007 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 SERBP1P5-201ENST00000510079 1181 ntBASIC15.48■□□□□ 0.07
LRRK2Q5S007 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 AC004945.1-201ENST00000416738 983 ntBASIC15.48■□□□□ 0.07
LRRK2Q5S007 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 AC074386.1-202ENST00000463561 864 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms