Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM71Q2Q1W2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TRIM71Q2Q1W2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM71Q2Q1W2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 AL031598.1-201ENST00000561511 1773 ntBASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 SPDYE21P-201ENST00000413323 827 ntBASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM71Q2Q1W2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 AC004832.2-201ENST00000426397 482 ntBASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 RNA5SP416-201ENST00000516838 111 ntBASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 AP001160.2-201ENST00000596071 487 ntBASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM71Q2Q1W2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 AC126763.1-201ENST00000552015 2118 ntBASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM71Q2Q1W2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 PHGDH-209ENST00000641074 1780 ntBASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM71Q2Q1W2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms